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Table IV
Polymorphisms of the EST-SSR markers, based on samples of 10 C. sieboldii var. sieboldii (CSS), four C. cuspidata var. cuspidata (CCC), one C. sieboldii var. lutchuensis (OKN) and one C. cuspidata var. carlesii (TWR). For OKN and TWR individuals, allele size is shown.
Locus | Expected size | CSS (N = 10) | CCC (N = 4) | OKN | TWR | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
(bp) | Na | Ho | Size range (bp) | Na | Ho | Size range (bp) | ||||||
CcC00055 | 285 | 5 | 0.8 | 285–297 | 5 | 0.5 | 277–293 | 287/295 | 281/283 | |||
CcC00087 | 400 | 5 | 0.7 | 391–401 | 5 | 0.75 | 391–401 | 393/397 | 399/401 | |||
CcC00610 | 381 | 7 | 0.9 | 370–385 | 3 | 1.0 | 370–376 | 374/380 | 374/378 | |||
CcC00660 | 132 | 3 | 0.2 | 133–137 | 4 | 0.5 | 125–141 | 135/137 | 133/133 | |||
CcC00972 | 257 | 8 | 0.7 | 241–261 | 4 | 0.75 | 241–253 | 251/251 | 243/259 | |||
CcC01471 | 129 | 8 | 0.5 | 110–173 | 4 | 0.5 | 114–125 | 125/133 | 121/125 | |||
CcC01513 | 375 | 3 | 0.4 | 368–377 | 2 | 0.5 | 368–374 | 374/374 | 368/368 | |||
CcC02014 | 201 | 7 | 0.7 | 201–220 | 2 | 0.0 | 201–203 | 201/220 | 201/201 | |||
CcC02022 | 347 | 9 | 0.8 | 352–372 | 4 | 0.25 | 353–365 | 356/356 | 355/373 | |||
CcC02069 | 123 | 6 | 0.8 | 117–129 | 6 | 0.5 | 117–136 | 117/120 | 114/117 | |||
CcC02075 | 211 | 5 | 0.6 | 214–224 | 4 | 0.75 | 212–224 | 216/216 | 206/206 | |||
CcC02291 | 107 | 3 | 0.3 | 94–106 | 2 | 0.5 | 97–100 | 106/106 | 100/103 | |||
CcC02375 | 318 | 6 | 0.6 | 309–332 | 3 | 0.75 | 321–327 | 309/321 | 324/324 | |||
CcC02438 | 319 | 7 | 0.5 | 271–322 | 5 | 1.0 | 267–283 | 271/271 | 275/275 | |||
CcC02464 | 230 | 8 | 0.9 | 206–226 | 4 | 0.25 | 208–218 | 216/224 | 220/234 | |||
CcC02535 | 369 | 7 | 0.7 | 365–379 | 6 | 0.75 | 364–375 | 375/375 | 373/375 |