Free Access
Supplementary Table IV
SSRs found in potential unigenes by SSRIT.pl script and estimation of SSR location.
| Potential unigene ID | SSR number | Motif length | Motif | Number of motif | Stat position | End position | SSR location |
|---|---|---|---|---|---|---|---|
| CcC00006_1 | 1 | 2 | at | 9 | 69 | 86 | Non-coding |
| CcC00019_1 | 1 | 3 | gaa | 6 | 35 | 52 | Coding |
| CcC00021_1 | 1 | 2 | ga | 10 | 34 | 53 | Non-coding |
| CcC00024_1 | 1 | 2 | ct | 16 | 12 | 43 | Non-coding |
| CcC00033_1 | 1 | 4 | gagc | 5 | 424 | 443 | Non-coding |
| CcC00034_1 | 1 | 2 | tc | 15 | 21 | 50 | Unknown |
| CcC00037_1 | 1 | 2 | tc | 17 | 54 | 87 | Non-coding |
| CcC00048_1 | 1 | 2 | tc | 9 | 86 | 103 | Unknown |
| CcC00052_1 | 1 | 2 | ct | 15 | 17 | 46 | Non-coding |
| CcC00053_1 | 1 | 2 | ga | 40 | 9 | 88 | Non-coding |
| CcC00055_1 | 1 | 2 | at | 10 | 92 | 111 | Unknown |
| CcC00059_1 | 1 | 3 | aac | 6 | 193 | 210 | Coding |
| CcC00063_1 | 1 | 3 | aga | 6 | 373 | 390 | Coding |
| CcC00068_1 | 1 | 2 | ga | 13 | 33 | 58 | Non-coding |
| CcC00072_1 | 1 | 2 | ag | 9 | 14 | 31 | Non-coding |
| CcC00083_1 | 1 | 2 | tc | 11 | 96 | 117 | Non-coding |
| CcC00087_1 | 1 | 2 | tc | 13 | 32 | 57 | Non-coding |
| CcC00110_1 | 1 | 3 | tat | 6 | 541 | 558 | Unknown |
| CcC00112_1 | 1 | 2 | tc | 20 | 38 | 77 | Non-coding |
| CcC00114_1 | 1 | 3 | tta | 6 | 59 | 76 | Non-coding |
| CcC00118_1 | 1 | 3 | ccg | 6 | 328 | 345 | Coding |
| CcC00127_1 | 1 | 2 | ct | 9 | 11 | 28 | Non-coding |
| CcC00132_1 | 1 | 2 | at | 12 | 377 | 400 | Non-coding |
| CcC00134_1 | 1 | 2 | at | 12 | 473 | 496 | Non-coding |
| CcC00141_1 | 1 | 3 | aca | 6 | 21 | 38 | Coding |
| CcC00141_1 | 2 | 3 | aca | 6 | 202 | 219 | Coding |
| CcC00143_1 | 1 | 2 | ta | 16 | 563 | 594 | Non-coding |
| CcC00146_1 | 1 | 2 | ag | 12 | 128 | 151 | Non-coding |
| CcC00150_1 | 1 | 2 | ct | 21 | 14 | 55 | Non-coding |
| CcC00152_1 | 1 | 3 | tct | 7 | 239 | 259 | Coding |
| CcC00155_1 | 1 | 3 | tct | 8 | 119 | 142 | Coding |
| CcC00157_1 | 1 | 2 | ta | 12 | 365 | 388 | Non-coding |
| CcC00158_1 | 1 | 2 | ag | 9 | 105 | 122 | Non-coding |
| CcC00171_1 | 1 | 2 | ct | 13 | 170 | 195 | Non-coding |
| CcC00172_1 | 1 | 2 | ta | 11 | 124 | 145 | Non-coding |
| CcC00176_1 | 1 | 3 | gga | 6 | 304 | 321 | Coding |
| CcC00206_1 | 1 | 3 | ttc | 6 | 397 | 414 | Unknown |
| CcC00231_2 | 1 | 2 | ct | 9 | 8 | 25 | Non-coding |
| CcC00233_1 | 1 | 3 | ttc | 6 | 17 | 34 | Non-coding |
| CcC00248_1 | 1 | 2 | tc | 10 | 9 | 28 | Non-coding |
| CcC00248_1 | 2 | 2 | ct | 11 | 109 | 130 | Non-coding |
| CcC00253_1 | 1 | 2 | tc | 14 | 27 | 54 | Non-coding |
| CcC00260_1 | 1 | 3 | gga | 7 | 276 | 296 | Coding |
| CcC00270_1 | 1 | 3 | ctt | 6 | 101 | 118 | Coding |
| CcC00296_1 | 1 | 3 | tta | 7 | 496 | 516 | Non-coding |
| CcC00301_1 | 1 | 2 | ct | 9 | 25 | 42 | Non-coding |
| CcC00307_1 | 1 | 2 | ct | 13 | 63 | 88 | Non-coding |
| CcC00314_1 | 1 | 2 | ac | 16 | 76 | 107 | Unknown |
| CcC00314_1 | 2 | 2 | at | 11 | 108 | 129 | Unknown |
| CcC00315_1 | 1 | 2 | ct | 10 | 63 | 82 | Non-coding |
| CcC00321_1 | 1 | 3 | tct | 6 | 53 | 70 | Non-coding |
| CcC00329_1 | 1 | 2 | tc | 10 | 25 | 44 | Non-coding |
| CcC00338_1 | 1 | 2 | ag | 12 | 78 | 101 | Non-coding |
| CcC00338_1 | 2 | 3 | aca | 6 | 360 | 377 | Coding |
| CcC00338_1 | 3 | 3 | gga | 8 | 392 | 415 | Coding |
| CcC00348_1 | 1 | 3 | caa | 6 | 148 | 165 | Coding |
| CcC00370_1 | 1 | 3 | aag | 6 | 163 | 180 | Coding |
| CcC00370_1 | 2 | 3 | aag | 8 | 259 | 282 | Coding |
| CcC00370_1 | 3 | 3 | aag | 6 | 292 | 309 | Coding |
| CcC00374_1 | 1 | 2 | tc | 10 | 68 | 87 | Unknown |
| CcC00376_1 | 1 | 2 | ag | 12 | 16 | 39 | Non-coding |
| CcC00385_1 | 1 | 2 | at | 12 | 541 | 564 | Non-coding |
| CcC00397_1 | 1 | 2 | ct | 15 | 74 | 103 | Non-coding |
| CcC00400_1 | 1 | 3 | gaa | 8 | 295 | 318 | Coding |
| CcC00418_1 | 1 | 3 | caa | 6 | 319 | 336 | Coding |
| CcC00428_1 | 1 | 2 | ct | 9 | 61 | 78 | Non-coding |
| CcC00435_1 | 1 | 2 | ca | 14 | 9 | 36 | Unknown |
| CcC00440_1 | 1 | 3 | cca | 8 | 175 | 198 | Coding |
| CcC00446_1 | 1 | 2 | ag | 13 | 125 | 150 | Non-coding |
| CcC00454_1 | 1 | 4 | gtca | 56 | 9 | 232 | Unknown |
| CcC00473_1 | 1 | 3 | ctc | 6 | 285 | 302 | Coding |
| CcC00487_1 | 1 | 3 | gta | 7 | 14 | 34 | Coding |
| CcC00495_1 | 1 | 3 | tct | 7 | 6 | 26 | Non-coding |
| CcC00511_1 | 1 | 2 | tc | 10 | 17 | 36 | Non-coding |
| CcC00524_1 | 1 | 2 | ct | 9 | 78 | 95 | Non-coding |
| CcC00534_1 | 1 | 3 | gga | 6 | 312 | 329 | Coding |
| CcC00535_1 | 1 | 2 | ta | 9 | 174 | 191 | Non-coding |
| CcC00540_1 | 1 | 3 | tct | 6 | 99 | 116 | Coding |
| CcC00556_1 | 1 | 3 | tct | 14 | 85 | 126 | Non-coding |
| CcC00560_1 | 1 | 3 | atc | 9 | 405 | 431 | Coding |
| CcC00567_1 | 1 | 2 | ct | 19 | 49 | 86 | Non-coding |
| CcC00583_1 | 1 | 2 | tc | 11 | 218 | 239 | Non-coding |
| CcC00599_1 | 1 | 2 | ct | 10 | 140 | 159 | Non-coding |
| CcC00609_1 | 1 | 3 | gga | 6 | 151 | 168 | Coding |
| CcC00610_1 | 1 | 2 | ta | 12 | 334 | 357 | Non-coding |
| CcC00634_1 | 1 | 2 | tc | 11 | 45 | 66 | Unknown |
| CcC00637_1 | 1 | 2 | ct | 12 | 27 | 50 | Non-coding |
| CcC00646_1 | 1 | 2 | ta | 11 | 18 | 39 | Non-coding |
| CcC00651_1 | 1 | 2 | ga | 13 | 29 | 54 | Non-coding |
| CcC00660_1 | 1 | 2 | ct | 9 | 90 | 107 | Non-coding |
| CcC00660_1 | 2 | 3 | aac | 6 | 333 | 350 | Coding |
| CcC00678_1 | 1 | 2 | ag | 14 | 25 | 52 | Non-coding |
| CcC00678_1 | 2 | 2 | ga | 11 | 79 | 100 | Non-coding |
| CcC00705_1 | 1 | 3 | tcc | 6 | 31 | 48 | Coding |
| CcC00729_1 | 1 | 2 | tc | 21 | 42 | 83 | Unknown |
| CcC00729_1 | 2 | 2 | ag | 16 | 159 | 190 | Unknown |
| CcC00735_1 | 1 | 2 | ag | 11 | 13 | 34 | Non-coding |
| CcC00744_1 | 1 | 4 | ttat | 5 | 79 | 98 | Unknown |
| CcC00749_1 | 1 | 2 | tc | 17 | 156 | 189 | Non-coding |
| CcC00750_1 | 1 | 2 | tc | 14 | 128 | 155 | Unknown |
| CcC00760_1 | 1 | 2 | ct | 13 | 9 | 34 | Non-coding |
| CcC00761_1 | 1 | 3 | aca | 7 | 316 | 336 | Coding |
| CcC00761_1 | 2 | 3 | agg | 6 | 463 | 480 | Coding |
| CcC00764_1 | 1 | 3 | ttc | 8 | 164 | 187 | Non-coding |
| CcC00767_1 | 1 | 3 | cac | 8 | 95 | 118 | Coding |
| CcC00769_1 | 1 | 2 | tc | 10 | 63 | 82 | Non-coding |
| CcC00782_1 | 1 | 3 | gaa | 6 | 361 | 378 | Coding |
| CcC00785_1 | 1 | 2 | ct | 15 | 12 | 41 | Non-coding |
| CcC00795_1 | 1 | 3 | ttc | 19 | 288 | 344 | Non-coding |
| CcC00804_1 | 1 | 2 | ct | 11 | 39 | 60 | Non-coding |
| CcC00816_1 | 1 | 3 | gaa | 6 | 170 | 187 | Coding |
| CcC00816_1 | 2 | 3 | gaa | 6 | 276 | 293 | Coding |
| CcC00817_1 | 1 | 4 | tctt | 6 | 27 | 50 | Non-coding |
| CcC00824_1 | 1 | 2 | ct | 11 | 39 | 60 | Unknown |
| CcC00824_1 | 2 | 2 | ct | 14 | 206 | 233 | Unknown |
| CcC00845_1 | 1 | 2 | ga | 11 | 555 | 576 | Unknown |
| CcC00845_1 | 2 | 3 | tgt | 6 | 197 | 214 | Unknown |
| CcC00849_1 | 1 | 3 | caa | 6 | 233 | 250 | Coding |
| CcC00855_1 | 1 | 3 | gga | 6 | 315 | 332 | Coding |
| CcC00857_1 | 1 | 2 | tc | 13 | 22 | 47 | Non-coding |
| CcC00857_1 | 2 | 2 | ca | 17 | 47 | 80 | Non-coding |
| CcC00866_1 | 1 | 2 | ct | 10 | 45 | 64 | Non-coding |
| CcC00878_1 | 1 | 3 | tct | 7 | 42 | 62 | Coding |
| CcC00879_1 | 1 | 4 | acca | 5 | 274 | 293 | Non-coding |
| CcC00884_1 | 1 | 2 | gt | 10 | 385 | 404 | Unknown |
| CcC00897_1 | 1 | 2 | tc | 12 | 11 | 34 | Non-coding |
| CcC00936_1 | 1 | 3 | aat | 7 | 30 | 50 | Non-coding |
| CcC00948_1 | 1 | 2 | ct | 16 | 25 | 56 | Non-coding |
| CcC00954_1 | 1 | 2 | tc | 9 | 100 | 117 | Non-coding |
| CcC00959_1 | 1 | 3 | cca | 6 | 354 | 371 | Coding |
| CcC00966_1 | 1 | 3 | gaa | 10 | 55 | 84 | Coding |
| CcC00968_1 | 1 | 2 | tc | 11 | 698 | 719 | Non-coding |
| CcC00970_1 | 1 | 3 | gag | 6 | 315 | 332 | Non-coding |
| CcC00972_1 | 1 | 2 | ct | 55 | 10 | 119 | Non-coding |
| CcC00972_2 | 1 | 2 | ga | 55 | 8 | 117 | Non-coding |
| CcC00973_1 | 1 | 2 | tc | 14 | 116 | 143 | Non-coding |
| CcC00983_1 | 1 | 2 | ct | 71 | 9 | 150 | Unknown |
| CcC00989_1 | 1 | 2 | ct | 14 | 37 | 64 | Non-coding |
| CcC00997_1 | 1 | 3 | gga | 6 | 315 | 332 | Coding |
| CcC01013_1 | 1 | 3 | acc | 7 | 241 | 261 | Coding |
| CcC01013_1 | 2 | 3 | cca | 6 | 335 | 352 | Coding |
| CcC01040_1 | 1 | 2 | ag | 18 | 132 | 167 | Non-coding |
| CcC01059_1 | 1 | 3 | gct | 6 | 399 | 416 | Coding |
| CcC01065_1 | 1 | 2 | ag | 11 | 494 | 515 | Non-coding |
| CcC01067_1 | 1 | 3 | agg | 6 | 34 | 51 | Coding |
| CcC01073_1 | 1 | 2 | ga | 13 | 160 | 185 | Non-coding |
| CcC01078_1 | 1 | 3 | cac | 6 | 123 | 140 | Coding |
| CcC01090_1 | 1 | 2 | tc | 9 | 13 | 30 | Non-coding |
| CcC01097_1 | 1 | 2 | at | 12 | 510 | 533 | Non-coding |
| CcC01111_1 | 1 | 3 | gaa | 11 | 91 | 123 | Non-coding |
| CcC01135_1 | 1 | 3 | ctt | 8 | 166 | 189 | Coding |
| CcC01146_1 | 1 | 2 | tc | 9 | 20 | 37 | Non-coding |
| CcC01157_1 | 1 | 2 | ag | 9 | 16 | 33 | Non-coding |
| CcC01160_1 | 1 | 3 | tcc | 7 | 141 | 161 | Coding |
| CcC01167_1 | 1 | 3 | gga | 6 | 320 | 337 | Coding |
| CcC01175_1 | 1 | 2 | ct | 9 | 19 | 36 | Non-coding |
| CcC01183_1 | 1 | 2 | ct | 9 | 26 | 43 | Non-coding |
| CcC01191_1 | 1 | 3 | acc | 6 | 85 | 102 | Coding |
| CcC01225_1 | 1 | 2 | ta | 9 | 603 | 620 | Non-coding |
| CcC01226_1 | 1 | 2 | ct | 14 | 37 | 64 | Non-coding |
| CcC01229_1 | 1 | 3 | cta | 9 | 189 | 215 | Non-coding |
| CcC01229_1 | 2 | 3 | ggt | 6 | 265 | 282 | Non-coding |
| CcC01247_1 | 1 | 3 | cca | 7 | 337 | 357 | Coding |
| CcC01249_1 | 1 | 2 | tc | 50 | 9 | 108 | Non-coding |
| CcC01249_2 | 1 | 2 | tc | 54 | 232 | 339 | Unknown |
| CcC01257_1 | 1 | 4 | tctt | 6 | 220 | 243 | Non-coding |
| CcC01271_1 | 1 | 2 | tc | 11 | 9 | 30 | Non-coding |
| CcC01271_1 | 2 | 3 | cag | 6 | 497 | 514 | Coding |
| CcC01279_1 | 1 | 3 | tca | 8 | 240 | 263 | Non-coding |
| CcC01298_1 | 1 | 3 | tct | 8 | 52 | 75 | Non-coding |
| CcC01303_1 | 1 | 3 | agc | 6 | 300 | 317 | Coding |
| CcC01314_1 | 1 | 2 | tc | 11 | 9 | 30 | Non-coding |
| CcC01316_1 | 1 | 2 | ct | 9 | 46 | 63 | Non-coding |
| CcC01317_1 | 1 | 2 | tc | 10 | 50 | 69 | Non-coding |
| CcC01317_2 | 1 | 2 | tc | 10 | 39 | 58 | Non-coding |
| CcC01317_2 | 2 | 3 | gaa | 8 | 252 | 275 | Coding |
| CcC01321_1 | 1 | 3 | gga | 6 | 300 | 317 | Coding |
| CcC01335_1 | 1 | 2 | ga | 14 | 186 | 213 | Non-coding |
| CcC01358_1 | 1 | 2 | tc | 9 | 167 | 184 | Unknown |
| CcC01361_1 | 1 | 3 | ttc | 9 | 347 | 373 | Unknown |
| CcC01400_1 | 1 | 3 | ggc | 6 | 449 | 466 | Coding |
| CcC01401_1 | 1 | 3 | gga | 6 | 324 | 341 | Coding |
| CcC01410_1 | 1 | 3 | caa | 6 | 323 | 340 | Coding |
| CcC01420_1 | 1 | 2 | ag | 13 | 176 | 201 | Non-coding |
| CcC01426_1 | 1 | 2 | ct | 9 | 31 | 48 | Non-coding |
| CcC01428_1 | 1 | 2 | ct | 57 | 9 | 122 | Unknown |
| CcC01435_1 | 1 | 2 | tc | 10 | 78 | 97 | Non-coding |
| CcC01442_1 | 1 | 2 | ct | 17 | 14 | 47 | Non-coding |
| CcC01442_1 | 2 | 2 | tc | 9 | 74 | 91 | Non-coding |
| CcC01451_1 | 1 | 3 | cca | 9 | 171 | 197 | Coding |
| CcC01462_1 | 1 | 2 | ct | 18 | 9 | 44 | Non-coding |
| CcC01471_1 | 1 | 2 | tc | 14 | 69 | 96 | Non-coding |
| CcC01479_1 | 1 | 2 | ca | 9 | 50 | 67 | Non-coding |
| CcC01500_1 | 1 | 2 | ct | 18 | 37 | 72 | Unknown |
| CcC01500_1 | 2 | 2 | tc | 13 | 249 | 274 | Unknown |
| CcC01504_1 | 1 | 2 | ct | 9 | 312 | 329 | Non-coding |
| CcC01513_1 | 1 | 3 | cag | 6 | 251 | 268 | Coding |
| CcC01546_1 | 1 | 2 | tc | 13 | 131 | 156 | Non-coding |
| CcC01548_1 | 1 | 2 | ag | 16 | 71 | 102 | Unknown |
| CcC01564_1 | 1 | 3 | ctc | 8 | 50 | 73 | Non-coding |
| CcC01568_1 | 1 | 3 | cca | 6 | 222 | 239 | Coding |
| CcC01593_1 | 1 | 3 | caa | 8 | 91 | 114 | Coding |
| CcC01604_1 | 1 | 2 | ag | 22 | 278 | 321 | Unknown |
| CcC01611_1 | 1 | 3 | gca | 8 | 39 | 62 | Coding |
| CcC01614_1 | 1 | 3 | cca | 6 | 316 | 333 | Coding |
| CcC01619_1 | 1 | 2 | tc | 11 | 24 | 45 | Non-coding |
| CcC01640_1 | 1 | 2 | ct | 10 | 500 | 519 | Unknown |
| CcC01650_1 | 1 | 2 | at | 14 | 276 | 303 | Unknown |
| CcC01653_1 | 1 | 3 | acc | 7 | 388 | 408 | Unknown |
| CcC01662_1 | 1 | 3 | ata | 9 | 177 | 203 | Non-coding |
| CcC01671_2 | 1 | 3 | atg | 7 | 98 | 118 | Coding |
| CcC01672_1 | 1 | 2 | ct | 12 | 27 | 50 | Non-coding |
| CcC01672_1 | 2 | 2 | ac | 12 | 183 | 206 | Non-coding |
| CcC01681_1 | 1 | 2 | ga | 9 | 10 | 27 | Non-coding |
| CcC01686_1 | 1 | 2 | ct | 13 | 74 | 99 | Non-coding |
| CcC01687_1 | 1 | 3 | cca | 7 | 257 | 277 | Coding |
| CcC01707_1 | 1 | 2 | ct | 13 | 49 | 74 | Unknown |
| CcC01727_1 | 1 | 3 | act | 6 | 207 | 224 | Coding |
| CcC01736_1 | 1 | 3 | gga | 6 | 324 | 341 | Coding |
| CcC01739_1 | 1 | 3 | gca | 7 | 292 | 312 | Coding |
| CcC01748_1 | 1 | 2 | tc | 17 | 153 | 186 | Unknown |
| CcC01767_1 | 1 | 2 | ct | 11 | 24 | 45 | Non-coding |
| CcC01772_1 | 1 | 2 | ag | 12 | 105 | 128 | Non-coding |
| CcC01777_1 | 1 | 3 | cgc | 7 | 475 | 495 | Coding |
| CcC01805_1 | 1 | 3 | atc | 6 | 37 | 54 | Coding |
| CcC01814_1 | 1 | 3 | ccg | 8 | 74 | 97 | Coding |
| CcC01821_1 | 1 | 2 | ca | 17 | 17 | 50 | Unknown |
| CcC01824_1 | 1 | 2 | ct | 11 | 9 | 30 | Non-coding |
| CcC01851_1 | 1 | 3 | acc | 8 | 163 | 186 | Coding |
| CcC01851_1 | 2 | 3 | aac | 6 | 319 | 336 | Coding |
| CcC01857_1 | 1 | 3 | tct | 9 | 201 | 227 | Non-coding |
| CcC01865_1 | 1 | 2 | tc | 10 | 46 | 65 | Non-coding |
| CcC01873_1 | 1 | 2 | ct | 16 | 10 | 41 | Non-coding |
| CcC01875_1 | 1 | 3 | gag | 7 | 145 | 165 | Coding |
| CcC01879_1 | 1 | 2 | ct | 13 | 11 | 36 | Non-coding |
| CcC01882_1 | 1 | 3 | ttc | 6 | 173 | 190 | Non-coding |
| CcC01890_1 | 1 | 3 | tgc | 6 | 191 | 208 | Coding |
| CcC01899_1 | 1 | 3 | gaa | 6 | 61 | 78 | Coding |
| CcC01909_1 | 1 | 3 | gga | 6 | 315 | 332 | Coding |
| CcC01916_1 | 1 | 2 | tc | 12 | 8 | 31 | Non-coding |
| CcC01931_1 | 1 | 2 | ag | 9 | 34 | 51 | Non-coding |
| CcC01934_1 | 1 | 3 | gcc | 6 | 240 | 257 | Coding |
| CcC01952_1 | 1 | 2 | tc | 13 | 101 | 126 | Non-coding |
| CcC01954_1 | 1 | 2 | tc | 18 | 66 | 101 | Non-coding |
| CcC01967_1 | 1 | 2 | ct | 11 | 88 | 109 | Non-coding |
| CcC01967_1 | 2 | 3 | gtt | 6 | 50 | 67 | Non-coding |
| CcC01969_1 | 1 | 3 | cca | 6 | 302 | 319 | Coding |
| CcC01989_1 | 1 | 3 | tgt | 7 | 110 | 130 | Non-coding |
| CcC01991_1 | 1 | 2 | at | 9 | 628 | 645 | Non-coding |
| CcC01997_1 | 1 | 2 | ct | 13 | 75 | 100 | Unknown |
| CcC01999_1 | 1 | 2 | tc | 16 | 141 | 172 | Non-coding |
| CcC02014_1 | 1 | 2 | tc | 11 | 37 | 58 | Non-coding |
| CcC02014_1 | 2 | 3 | aag | 7 | 77 | 97 | Non-coding |
| CcC02022_1 | 1 | 2 | ct | 12 | 159 | 182 | Non-coding |
| CcC02023_1 | 1 | 2 | ct | 11 | 27 | 48 | Non-coding |
| CcC02027_1 | 1 | 2 | tc | 17 | 48 | 81 | Non-coding |
| CcC02031_1 | 1 | 3 | gtc | 7 | 550 | 570 | Coding |
| CcC02044_1 | 1 | 2 | gt | 9 | 93 | 110 | Non-coding |
| CcC02044_1 | 2 | 2 | ga | 16 | 111 | 142 | Non-coding |
| CcC02053_1 | 1 | 2 | ag | 10 | 49 | 68 | Non-coding |
| CcC02057_1 | 1 | 2 | ta | 18 | 637 | 672 | Non-coding |
| CcC02065_1 | 1 | 2 | ct | 11 | 91 | 112 | Non-coding |
| CcC02069_1 | 1 | 3 | caa | 6 | 177 | 194 | Coding |
| CcC02075_1 | 1 | 2 | ct | 10 | 22 | 41 | Non-coding |
| CcC02084_1 | 1 | 2 | ct | 9 | 7 | 24 | Non-coding |
| CcC02097_1 | 1 | 2 | tc | 15 | 34 | 63 | Non-coding |
| CcC02103_1 | 1 | 2 | ta | 16 | 189 | 220 | Non-coding |
| CcC02107_1 | 1 | 3 | ggt | 10 | 481 | 510 | Coding |
| CcC02111_1 | 1 | 2 | tg | 9 | 36 | 53 | Non-coding |
| CcC02112_1 | 1 | 2 | ta | 16 | 52 | 83 | Unknown |
| CcC02123_1 | 1 | 2 | ct | 10 | 30 | 49 | Non-coding |
| CcC02162_1 | 1 | 2 | ct | 10 | 16 | 35 | Non-coding |
| CcC02171_1 | 1 | 2 | ct | 10 | 1 | 20 | Unknown |
| CcC02182_1 | 1 | 3 | gga | 6 | 314 | 331 | Coding |
| CcC02186_1 | 1 | 3 | tct | 9 | 73 | 99 | Non-coding |
| CcC02187_1 | 1 | 2 | ag | 20 | 163 | 202 | Unknown |
| CcC02197_1 | 1 | 2 | tc | 14 | 281 | 308 | Unknown |
| CcC02197_1 | 2 | 3 | ttc | 7 | 13 | 33 | Unknown |
| CcC02227_1 | 1 | 2 | tc | 9 | 40 | 57 | Non-coding |
| CcC02238_1 | 1 | 2 | at | 12 | 66 | 89 | Unknown |
| CcC02268_1 | 1 | 2 | ta | 14 | 533 | 560 | Non-coding |
| CcC02291_1 | 1 | 3 | cag | 9 | 262 | 288 | Coding |
| CcC02294_1 | 1 | 3 | aag | 6 | 75 | 92 | Non-coding |
| CcC02296_1 | 1 | 2 | ct | 15 | 53 | 82 | Non-coding |
| CcC02312_1 | 1 | 3 | ttc | 6 | 329 | 346 | Non-coding |
| CcC02315_1 | 1 | 2 | tc | 18 | 10 | 45 | Non-coding |
| CcC02329_1 | 1 | 3 | gat | 7 | 220 | 240 | Coding |
| CcC02337_1 | 1 | 2 | ct | 13 | 99 | 124 | Non-coding |
| CcC02358_1 | 1 | 2 | ag | 11 | 78 | 99 | Unknown |
| CcC02375_1 | 1 | 3 | gaa | 7 | 180 | 200 | Coding |
| CcC02379_1 | 1 | 2 | ct | 13 | 17 | 42 | Non-coding |
| CcC02384_1 | 1 | 2 | ct | 10 | 11 | 30 | Unknown |
| CcC02386_1 | 1 | 3 | gat | 7 | 320 | 340 | Coding |
| CcC02391_1 | 1 | 3 | gga | 6 | 291 | 308 | Coding |
| CcC02406_1 | 1 | 3 | tta | 8 | 158 | 181 | Non-coding |
| CcC02408_1 | 1 | 2 | ct | 11 | 358 | 379 | Unknown |
| CcC02416_1 | 1 | 2 | tc | 14 | 18 | 45 | Non-coding |
| CcC02418_1 | 1 | 2 | at | 10 | 639 | 658 | Non-coding |
| CcC02419_1 | 1 | 2 | ga | 10 | 480 | 499 | Non-coding |
| CcC02420_1 | 1 | 2 | ga | 13 | 71 | 96 | Non-coding |
| CcC02438_1 | 1 | 2 | ct | 10 | 34 | 53 | Non-coding |
| CcC02444_1 | 1 | 2 | tc | 11 | 48 | 69 | Non-coding |
| CcC02448_1 | 1 | 3 | aag | 9 | 322 | 348 | Unknown |
| CcC02450_1 | 1 | 2 | ct | 10 | 9 | 28 | Non-coding |
| CcC02464_1 | 1 | 2 | tc | 20 | 71 | 110 | Non-coding |
| CcC02489_1 | 1 | 2 | tc | 14 | 62 | 89 | Non-coding |
| CcC02489_1 | 2 | 2 | tc | 19 | 138 | 175 | Non-coding |
| CcC02496_1 | 1 | 2 | tc | 10 | 34 | 53 | Non-coding |
| CcC02500_1 | 1 | 3 | taa | 6 | 290 | 307 | Non-coding |
| CcC02501_1 | 1 | 3 | aca | 7 | 179 | 199 | Coding |
| CcC02510_1 | 1 | 2 | ag | 9 | 267 | 284 | Unknown |
| CcC02512_1 | 1 | 3 | gga | 7 | 257 | 277 | Coding |
| CcC02524_1 | 1 | 3 | gcc | 6 | 302 | 319 | Coding |
| CcC02535_1 | 1 | 2 | at | 12 | 306 | 329 | Non-coding |